85 lines
4 KiB
Text
85 lines
4 KiB
Text
perl-blead
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==========
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cpanm (App::cpanminus) 1.7043 on perl 5.026000 built for x86_64-linux
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Work directory is /home/ryan/.cpanm/work/1493030733.28682
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You have make /usr/bin/make
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You have LWP 6.26
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You have /bin/tar: tar (GNU tar) 1.29
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Copyright (C) 2015 Free Software Foundation, Inc.
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License GPLv3+: GNU GPL version 3 or later <http://gnu.org/licenses/gpl.html>.
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This is free software: you are free to change and redistribute it.
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There is NO WARRANTY, to the extent permitted by law.
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Written by John Gilmore and Jay Fenlason.
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You have /usr/bin/unzip
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Searching Fry::Lib::BioPerl () on cpanmetadb ...
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Unpacking Fry-Lib-BioPerl-0.15.tar.gz
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--> Working on Fry::Lib::BioPerl
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Fetching http://www.cpan.org/authors/id/B/BO/BOZO/Fry-Lib-BioPerl-0.15.tar.gz ... OK
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Fry-Lib-BioPerl-0.15/
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Fry-Lib-BioPerl-0.15/README
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Fry-Lib-BioPerl-0.15/Changes
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Fry-Lib-BioPerl-0.15/t/
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Fry-Lib-BioPerl-0.15/t/pod.t
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Fry-Lib-BioPerl-0.15/t/bioperl.t
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Fry-Lib-BioPerl-0.15/META.yml
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Fry-Lib-BioPerl-0.15/Makefile.PL
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Fry-Lib-BioPerl-0.15/lib/
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Fry-Lib-BioPerl-0.15/lib/Fry/
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Fry-Lib-BioPerl-0.15/lib/Fry/Lib/
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Fry-Lib-BioPerl-0.15/lib/Fry/Lib/BioPerl.pm
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Entering Fry-Lib-BioPerl-0.15
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Checking configure dependencies from META.yml
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Running Makefile.PL
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Configuring Fry-Lib-BioPerl-0.15 ... Generating a Unix-style Makefile
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Writing Makefile for Fry::Lib::BioPerl
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Writing MYMETA.yml and MYMETA.json
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Checking dependencies from MYMETA.json ...
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Checking if you have ExtUtils::MakeMaker 0 ... Yes (7.24)
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OK
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Building and testing Fry-Lib-BioPerl-0.15 ... cp lib/Fry/Lib/BioPerl.pm blib/lib/Fry/Lib/BioPerl.pm
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Manifying 1 pod document
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PERL_DL_NONLAZY=1 "/home/ryan/perl5/perlbrew/perls/perl-blead/bin/perl5.26.0" "-MExtUtils::Command::MM" "-MTest::Harness" "-e" "undef *Test::Harness::Switches; test_harness(0, 'blib/lib', 'blib/arch')" t/*.t
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# Failed test 'use Fry::Lib::BioPerl;'
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# at t/bioperl.t line 6.
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# Tried to use 'Fry::Lib::BioPerl'.
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# Error: Can't locate Bio/Tools/Run/Alignment/Clustalw.pm in @INC (you may need to install the Bio::Tools::Run::Alignment::Clustalw module) (@INC contains: lib /home/ryan/.cpanm/work/1493030733.28682/Fry-Lib-BioPerl-0.15/blib/lib /home/ryan/.cpanm/work/1493030733.28682/Fry-Lib-BioPerl-0.15/blib/arch /home/ryan/perl5/perlbrew/perls/perl-blead/lib/site_perl/5.26.0/x86_64-linux /home/ryan/perl5/perlbrew/perls/perl-blead/lib/site_perl/5.26.0 /home/ryan/perl5/perlbrew/perls/perl-blead/lib/5.26.0/x86_64-linux /home/ryan/perl5/perlbrew/perls/perl-blead/lib/5.26.0 .) at lib/Fry/Lib/BioPerl.pm line 8.
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# BEGIN failed--compilation aborted at lib/Fry/Lib/BioPerl.pm line 8.
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# Compilation failed in require at t/bioperl.t line 6.
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# BEGIN failed--compilation aborted at t/bioperl.t line 6.
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# Looks like you failed 1 test of 1.
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t/bioperl.t ..
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Dubious, test returned 1 (wstat 256, 0x100)
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Failed 1/1 subtests
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t/pod.t ...... ok
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Test Summary Report
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-------------------
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t/bioperl.t (Wstat: 256 Tests: 1 Failed: 1)
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Failed test: 1
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Non-zero exit status: 1
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Files=2, Tests=2, 1 wallclock secs ( 0.01 usr 0.00 sys + 0.10 cusr 0.00 csys = 0.11 CPU)
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Result: FAIL
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Failed 1/2 test programs. 1/2 subtests failed.
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Makefile:831: recipe for target 'test_dynamic' failed
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make: *** [test_dynamic] Error 255
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! Installing Fry::Lib::BioPerl failed. See /home/ryan/.cpanm/work/1493030733.28682/build.log for details. Retry with --force to force install it.
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FAIL
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Command [cpanm --reinstall --verbose Fry::Lib::BioPerl] terminated with exit code 1 ($? = 256) under the following perl environment:
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Command terminated with non-zero status.
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Current perl:
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Name: perl-blead
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Path: /home/ryan/perl5/perlbrew/perls/perl-blead/bin/perl
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Config: -de -Dprefix=/home/ryan/perl5/perlbrew/perls/perl-blead -Dusedevel -Aeval:scriptdir=/home/ryan/perl5/perlbrew/perls/perl-blead/bin
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Compiled at: Mar 30 2017 03:10:09
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perlbrew:
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version: 0.78
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ENV:
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PERLBREW_ROOT: /home/ryan/perl5/perlbrew
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PERLBREW_HOME: /home/ryan/.perlbrew
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PERLBREW_PATH: /home/ryan/perl5/perlbrew/bin:/home/ryan/perl5/perlbrew/perls/perl-blead/bin
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PERLBREW_MANPATH: /home/ryan/perl5/perlbrew/perls/perl-blead/man
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