340 lines
14 KiB
Text
340 lines
14 KiB
Text
perl-blead
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==========
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cpanm (App::cpanminus) 1.7043 on perl 5.026000 built for x86_64-linux
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Work directory is /home/ryan/.cpanm/work/1493282533.2185
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You have make /usr/bin/make
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You have LWP 6.26
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You have /bin/tar: tar (GNU tar) 1.29
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Copyright (C) 2015 Free Software Foundation, Inc.
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License GPLv3+: GNU GPL version 3 or later <http://gnu.org/licenses/gpl.html>.
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This is free software: you are free to change and redistribute it.
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There is NO WARRANTY, to the extent permitted by law.
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Written by John Gilmore and Jay Fenlason.
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You have /usr/bin/unzip
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Searching Chemistry::File::MidasPattern () on cpanmetadb ...
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Unpacking Chemistry-MidasPattern-0.11.tar.gz
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--> Working on Chemistry::File::MidasPattern
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Fetching http://www.cpan.org/authors/id/I/IT/ITUB/Chemistry-MidasPattern-0.11.tar.gz ... OK
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Chemistry-MidasPattern-0.11/
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Chemistry-MidasPattern-0.11/Changes
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Chemistry-MidasPattern-0.11/lib/
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Chemistry-MidasPattern-0.11/lib/Chemistry/
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Chemistry-MidasPattern-0.11/lib/Chemistry/File/
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Chemistry-MidasPattern-0.11/lib/Chemistry/File/MidasPattern.pm
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Chemistry-MidasPattern-0.11/lib/Chemistry/MidasPattern.pm
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Chemistry-MidasPattern-0.11/Makefile.PL
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Chemistry-MidasPattern-0.11/MANIFEST
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Chemistry-MidasPattern-0.11/META.yml
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Chemistry-MidasPattern-0.11/README
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Chemistry-MidasPattern-0.11/t/
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Chemistry-MidasPattern-0.11/t/midas.t
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Chemistry-MidasPattern-0.11/t/pats/
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Chemistry-MidasPattern-0.11/t/pats/01.pat.pat
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Chemistry-MidasPattern-0.11/t/pats/02.pat.pat
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Chemistry-MidasPattern-0.11/t/pats/03.pat.pat
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Chemistry-MidasPattern-0.11/t/pats/04.pat.pat
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Chemistry-MidasPattern-0.11/t/pats/05.pat.pat
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Chemistry-MidasPattern-0.11/t/pats/06.pat.pat
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Chemistry-MidasPattern-0.11/t/pats/07.pat.pat
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Chemistry-MidasPattern-0.11/t/pats/08.pat.pat
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Chemistry-MidasPattern-0.11/t/pats/09.pat.pat
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Chemistry-MidasPattern-0.11/t/pats/10.pat
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Chemistry-MidasPattern-0.11/t/pats/11.pat
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Chemistry-MidasPattern-0.11/t/pats/12.pat
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Chemistry-MidasPattern-0.11/t/pats/13.pat
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Chemistry-MidasPattern-0.11/t/pats/14.pat
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Chemistry-MidasPattern-0.11/t/pats/15.pat
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Chemistry-MidasPattern-0.11/t/pats/16.pat
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Chemistry-MidasPattern-0.11/t/pats/17.pat
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Chemistry-MidasPattern-0.11/t/pats/18.pat
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Chemistry-MidasPattern-0.11/t/pod.t
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Chemistry-MidasPattern-0.11/test.pdb
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Entering Chemistry-MidasPattern-0.11
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Checking configure dependencies from META.yml
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Running Makefile.PL
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Configuring Chemistry-MidasPattern-0.11 ... Warning: prerequisite Chemistry::File::PDB 0.21 not found.
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Warning: prerequisite Chemistry::MacroMol 0.05 not found.
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Warning: prerequisite Chemistry::Mol 0.24 not found.
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Warning: prerequisite Chemistry::Pattern 0.20 not found.
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Checking if your kit is complete...
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Looks good
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Generating a Unix-style Makefile
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Writing Makefile for Chemistry::MidasPattern
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Writing MYMETA.yml and MYMETA.json
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Checking dependencies from MYMETA.json ...
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Checking if you have Chemistry::Pattern 0.20 ... No
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Checking if you have Chemistry::MacroMol 0.05 ... No
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Checking if you have Chemistry::Mol 0.24 ... No
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Checking if you have Chemistry::File::PDB 0.21 ... No
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Checking if you have ExtUtils::MakeMaker 0 ... Yes (7.24)
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Checking if you have Test::Simple 0 ... Yes (1.302078)
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Searching Chemistry::Pattern (0.20) on cpanmetadb ...
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Unpacking Chemistry-Pattern-0.27.tar.gz
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OK
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==> Found dependencies: Chemistry::Pattern, Chemistry::MacroMol, Chemistry::Mol, Chemistry::File::PDB
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--> Working on Chemistry::Pattern
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Fetching http://www.cpan.org/authors/id/I/IT/ITUB/Chemistry-Pattern-0.27.tar.gz ... OK
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Chemistry-Pattern-0.27/
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Chemistry-Pattern-0.27/META.yml
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Chemistry-Pattern-0.27/MANIFEST
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Chemistry-Pattern-0.27/Makefile.PL
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Chemistry-Pattern-0.27/README
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Chemistry-Pattern-0.27/t/
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Chemistry-Pattern-0.27/t/2.pat
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Chemistry-Pattern-0.27/t/noatom.pat
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Chemistry-Pattern-0.27/t/noring.pat
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Chemistry-Pattern-0.27/t/disc2.pat
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Chemistry-Pattern-0.27/t/Pattern.t
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Chemistry-Pattern-0.27/t/noring2.pat
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Chemistry-Pattern-0.27/t/pod.t
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Chemistry-Pattern-0.27/t/c.pat
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Chemistry-Pattern-0.27/t/stack.pat
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Chemistry-Pattern-0.27/t/ring.pat
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Chemistry-Pattern-0.27/t/1.pat
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Chemistry-Pattern-0.27/t/overlap.pat
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Chemistry-Pattern-0.27/t/btatom.pat
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Chemistry-Pattern-0.27/t/nobond.pat
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Chemistry-Pattern-0.27/t/disc1.pat
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Chemistry-Pattern-0.27/t/btbond.pat
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Chemistry-Pattern-0.27/t/anchor1.pat
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Chemistry-Pattern-0.27/t/c_c.pat
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Chemistry-Pattern-0.27/t/noring3.pat
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Chemistry-Pattern-0.27/Pattern.pm
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Chemistry-Pattern-0.27/Changes
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Chemistry-Pattern-0.27/Pattern/
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Chemistry-Pattern-0.27/Pattern/Bond.pm
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Chemistry-Pattern-0.27/Pattern/Atom.pm
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Entering Chemistry-Pattern-0.27
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Checking configure dependencies from META.yml
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Running Makefile.PL
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Configuring Chemistry-Pattern-0.27 ... Warning: prerequisite Chemistry::Mol 0.24 not found.
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Checking if your kit is complete...
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Looks good
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Generating a Unix-style Makefile
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Writing Makefile for Chemistry::Pattern
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Writing MYMETA.yml and MYMETA.json
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Checking dependencies from MYMETA.json ...
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Checking if you have Chemistry::Mol 0.24 ... No
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Checking if you have ExtUtils::MakeMaker 0 ... Yes (7.24)
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Checking if you have Test::Simple 0 ... Yes (1.302078)
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Searching Chemistry::Mol (0.24) on cpanmetadb ...
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Unpacking Chemistry-Mol-0.37.tar.gz
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OK
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==> Found dependencies: Chemistry::Mol
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--> Working on Chemistry::Mol
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Fetching http://www.cpan.org/authors/id/I/IT/ITUB/Chemistry-Mol-0.37.tar.gz ... OK
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Chemistry-Mol-0.37/
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Chemistry-Mol-0.37/META.yml
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Chemistry-Mol-0.37/MANIFEST
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Chemistry-Mol-0.37/Mol.pm
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Chemistry-Mol-0.37/Bond.pm
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Chemistry-Mol-0.37/Makefile.PL
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Chemistry-Mol-0.37/Obj.pm
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Chemistry-Mol-0.37/README
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Chemistry-Mol-0.37/t/
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Chemistry-Mol-0.37/t/change_id.t
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Chemistry-Mol-0.37/t/Bond.t
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Chemistry-Mol-0.37/t/compat.t
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Chemistry-Mol-0.37/t/Obj.t
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Chemistry-Mol-0.37/t/list.txt
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Chemistry-Mol-0.37/t/descriptor.t
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Chemistry-Mol-0.37/t/Atom.t
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Chemistry-Mol-0.37/t/empty.mol
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Chemistry-Mol-0.37/t/File.t
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Chemistry-Mol-0.37/t/pod.t
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Chemistry-Mol-0.37/t/Mol.t
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Chemistry-Mol-0.37/t/safe_clone.t
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Chemistry-Mol-0.37/t/geom.t
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Chemistry-Mol-0.37/t/mol.pl
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Chemistry-Mol-0.37/t/delete.t
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Chemistry-Mol-0.37/t/mol.pl.gz
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Chemistry-Mol-0.37/t/graph.t
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Chemistry-Mol-0.37/t/add_implicit_h.t
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Chemistry-Mol-0.37/t/Formula.t
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Chemistry-Mol-0.37/t/mem.t
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Chemistry-Mol-0.37/t/Dumper.t
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Chemistry-Mol-0.37/t/exception.t
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Chemistry-Mol-0.37/t/zlib.t
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Chemistry-Mol-0.37/Tutorial.pod
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Chemistry-Mol-0.37/File/
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Chemistry-Mol-0.37/File/Dumper.pm
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Chemistry-Mol-0.37/File/Formula.pm
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Chemistry-Mol-0.37/Changes
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Chemistry-Mol-0.37/formula_tests.txt
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Chemistry-Mol-0.37/File.pm
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Chemistry-Mol-0.37/Atom.pm
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Entering Chemistry-Mol-0.37
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Checking configure dependencies from META.yml
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Running Makefile.PL
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Configuring Chemistry-Mol-0.37 ... Checking if your kit is complete...
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Looks good
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Generating a Unix-style Makefile
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Writing Makefile for Chemistry::Mol
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Writing MYMETA.yml and MYMETA.json
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Checking dependencies from MYMETA.json ...
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Checking if you have Test::Simple 0 ... Yes (1.302078)
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Checking if you have ExtUtils::MakeMaker 0 ... Yes (7.24)
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Checking if you have Text::Balanced 0 ... Yes (2.03)
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Checking if you have Math::VectorReal 1 ... Yes (1.0)
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Checking if you have Scalar::Util 1.01 ... Yes (1.47)
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OK
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Building and testing Chemistry-Mol-0.37 ... cp Bond.pm blib/lib/Chemistry/Bond.pm
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cp Obj.pm blib/lib/Chemistry/Obj.pm
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cp File/Formula.pm blib/lib/Chemistry/File/Formula.pm
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cp File.pm blib/lib/Chemistry/File.pm
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cp File/Dumper.pm blib/lib/Chemistry/File/Dumper.pm
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cp Tutorial.pod blib/lib/Chemistry/Tutorial.pod
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cp Atom.pm blib/lib/Chemistry/Atom.pm
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cp Mol.pm blib/lib/Chemistry/Mol.pm
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Manifying 8 pod documents
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PERL_DL_NONLAZY=1 "/home/ryan/perl5/perlbrew/perls/perl-blead/bin/perl5.26.0" "-MExtUtils::Command::MM" "-MTest::Harness" "-e" "undef *Test::Harness::Switches; test_harness(0, 'blib/lib', 'blib/arch')" t/*.t
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t/add_implicit_h.t .. ok
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t/Atom.t ............ ok
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Unescaped left brace in regex is illegal here in regex; marked by <-- HERE in m/(?<!\\)%j{ <-- HERE (.*?)}/ at /home/ryan/.cpanm/work/1493282533.2185/Chemistry-Mol-0.37/blib/lib/Chemistry/File/Formula.pm line 203.
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Compilation failed in require at t/Bond.t line 5.
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BEGIN failed--compilation aborted at t/Bond.t line 5.
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t/Bond.t ............
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Dubious, test returned 255 (wstat 65280, 0xff00)
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No subtests run
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t/change_id.t ....... ok
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t/compat.t .......... ok
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t/delete.t .......... ok
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t/descriptor.t ...... ok
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t/Dumper.t .......... ok
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t/exception.t ....... ok
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t/File.t ............ ok
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# Failed test 'use Chemistry::File::Formula;'
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# at t/Formula.t line 10.
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# Tried to use 'Chemistry::File::Formula'.
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# Error: Unescaped left brace in regex is illegal here in regex; marked by <-- HERE in m/(?<!\\)%j{ <-- HERE (.*?)}/ at /home/ryan/.cpanm/work/1493282533.2185/Chemistry-Mol-0.37/blib/lib/Chemistry/File/Formula.pm line 203.
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# Compilation failed in require at t/Formula.t line 10.
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# BEGIN failed--compilation aborted at t/Formula.t line 10.
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No class installed for type 'formula' at t/Formula.t line 13.
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# Looks like your test exited with 255 just after 1.
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t/Formula.t .........
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Dubious, test returned 255 (wstat 65280, 0xff00)
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Failed 18/18 subtests
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t/geom.t ............ ok
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Unescaped left brace in regex is illegal here in regex; marked by <-- HERE in m/(?<!\\)%j{ <-- HERE (.*?)}/ at /home/ryan/.cpanm/work/1493282533.2185/Chemistry-Mol-0.37/blib/lib/Chemistry/File/Formula.pm line 203.
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Compilation failed in require at /home/ryan/.cpanm/work/1493282533.2185/Chemistry-Mol-0.37/blib/lib/Chemistry/Mol.pm line 724.
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# Looks like your test exited with 255 just after 3.
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t/graph.t ...........
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Dubious, test returned 255 (wstat 65280, 0xff00)
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Failed 8/11 subtests
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t/mem.t ............. ok
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t/Mol.t ............. ok
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t/Obj.t ............. ok
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t/pod.t ............. ok
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t/safe_clone.t ...... ok
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t/zlib.t ............ ok
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Test Summary Report
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-------------------
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t/Bond.t (Wstat: 65280 Tests: 0 Failed: 0)
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Non-zero exit status: 255
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Parse errors: No plan found in TAP output
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t/Formula.t (Wstat: 65280 Tests: 1 Failed: 1)
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Failed test: 1
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Non-zero exit status: 255
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Parse errors: Bad plan. You planned 18 tests but ran 1.
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t/graph.t (Wstat: 65280 Tests: 3 Failed: 0)
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Non-zero exit status: 255
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Parse errors: Bad plan. You planned 11 tests but ran 3.
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Files=19, Tests=200, 1 wallclock secs ( 0.05 usr 0.00 sys + 0.76 cusr 0.06 csys = 0.87 CPU)
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Result: FAIL
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Failed 3/19 test programs. 1/200 subtests failed.
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Makefile:873: recipe for target 'test_dynamic' failed
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make: *** [test_dynamic] Error 255
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! Installing Chemistry::Mol failed. See /home/ryan/.cpanm/work/1493282533.2185/build.log for details. Retry with --force to force install it.
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! Installing the dependencies failed: Module 'Chemistry::Mol' is not installed
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! Bailing out the installation for Chemistry-Pattern-0.27.
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Searching Chemistry::MacroMol (0.05) on cpanmetadb ...
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Unpacking Chemistry-MacroMol-0.06.tar.gz
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FAIL
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--> Working on Chemistry::MacroMol
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Fetching http://www.cpan.org/authors/id/I/IT/ITUB/Chemistry-MacroMol-0.06.tar.gz ... OK
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Chemistry-MacroMol-0.06/
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Chemistry-MacroMol-0.06/Domain.pm
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Chemistry-MacroMol-0.06/MANIFEST
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Chemistry-MacroMol-0.06/t/
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Chemistry-MacroMol-0.06/t/1.t
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Chemistry-MacroMol-0.06/MacroMol.pm
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Chemistry-MacroMol-0.06/Changes
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Chemistry-MacroMol-0.06/README
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Chemistry-MacroMol-0.06/Makefile.PL
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Entering Chemistry-MacroMol-0.06
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META.yml/json not found. Creating skeleton for it.
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Running Makefile.PL
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Configuring Chemistry-MacroMol-0.06 ... Warning: prerequisite Chemistry::Mol 0.24 not found.
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Checking if your kit is complete...
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Looks good
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Generating a Unix-style Makefile
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Writing Makefile for Chemistry::MacroMol
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Writing MYMETA.yml and MYMETA.json
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Checking dependencies from MYMETA.json ...
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Checking if you have Scalar::Util 0 ... Yes (1.47)
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Checking if you have ExtUtils::MakeMaker 0 ... Yes (7.24)
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Checking if you have Chemistry::Mol 0.24 ... No
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Already tried Chemistry::Mol. Skipping.
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! Installing the dependencies failed: Module 'Chemistry::Mol' is not installed
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! Bailing out the installation for Chemistry-MacroMol-0.06.
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Already tried Chemistry::Mol. Skipping.
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Searching Chemistry::File::PDB (0.21) on cpanmetadb ...
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Unpacking Chemistry-File-PDB-0.23.tar.gz
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OK
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==> Found dependencies: Chemistry::Mol
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--> Working on Chemistry::File::PDB
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Fetching http://www.cpan.org/authors/id/I/IT/ITUB/Chemistry-File-PDB-0.23.tar.gz ... OK
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Chemistry-File-PDB-0.23/
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Chemistry-File-PDB-0.23/META.yml
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Chemistry-File-PDB-0.23/MANIFEST
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Chemistry-File-PDB-0.23/Makefile.PL
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Chemistry-File-PDB-0.23/README
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Chemistry-File-PDB-0.23/t/
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Chemistry-File-PDB-0.23/t/pod.t
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Chemistry-File-PDB-0.23/t/write.t
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Chemistry-File-PDB-0.23/t/pdb.t
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Chemistry-File-PDB-0.23/Changes
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Chemistry-File-PDB-0.23/test.pdb
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Chemistry-File-PDB-0.23/PDB.pm
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Entering Chemistry-File-PDB-0.23
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Checking configure dependencies from META.yml
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Running Makefile.PL
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Configuring Chemistry-File-PDB-0.23 ... Warning: prerequisite Chemistry::MacroMol 0.05 not found.
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Warning: prerequisite Chemistry::Mol 0.30 not found.
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Checking if your kit is complete...
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Looks good
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Generating a Unix-style Makefile
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Writing Makefile for Chemistry::File::PDB
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Writing MYMETA.yml and MYMETA.json
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Checking dependencies from MYMETA.json ...
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Checking if you have ExtUtils::MakeMaker 0 ... Yes (7.24)
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Checking if you have Chemistry::Mol 0.30 ... No
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Checking if you have Chemistry::MacroMol 0.05 ... No
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Already tried Chemistry::Mol. Skipping.
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Already tried Chemistry::MacroMol. Skipping.
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! Installing the dependencies failed: Module 'Chemistry::Mol' is not installed, Module 'Chemistry::MacroMol' is not installed
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! Bailing out the installation for Chemistry-File-PDB-0.23.
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! Installing the dependencies failed: Module 'Chemistry::Mol' is not installed, Module 'Chemistry::MacroMol' is not installed, Module 'Chemistry::Pattern' is not installed, Module 'Chemistry::File::PDB' is not installed
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! Bailing out the installation for Chemistry-MidasPattern-0.11.
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OK
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==> Found dependencies: Chemistry::Mol, Chemistry::MacroMol
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Command [cpanm --reinstall --verbose Chemistry::File::MidasPattern] terminated with exit code 1 ($? = 256) under the following perl environment:
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Command terminated with non-zero status.
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Current perl:
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Name: perl-blead
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Path: /home/ryan/perl5/perlbrew/perls/perl-blead/bin/perl
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Config: -de -Dprefix=/home/ryan/perl5/perlbrew/perls/perl-blead -Dusedevel -Aeval:scriptdir=/home/ryan/perl5/perlbrew/perls/perl-blead/bin
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Compiled at: Mar 30 2017 03:10:09
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perlbrew:
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version: 0.78
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ENV:
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PERLBREW_ROOT: /home/ryan/perl5/perlbrew
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PERLBREW_HOME: /home/ryan/.perlbrew
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PERLBREW_PATH: /home/ryan/perl5/perlbrew/bin:/home/ryan/perl5/perlbrew/perls/perl-blead/bin
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PERLBREW_MANPATH: /home/ryan/perl5/perlbrew/perls/perl-blead/man
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