cpantestlogs/Bio::MAGETAB_incfailure.log
2017-05-02 18:44:36 -07:00

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8.1 KiB
Text

perl-blead
==========
cpanm (App::cpanminus) 1.7043 on perl 5.026000 built for x86_64-linux
Work directory is /home/ryan/.cpanm/work/1493623387.5065
You have make /usr/bin/make
You have LWP 6.26
You have /bin/tar: tar (GNU tar) 1.29
Copyright (C) 2015 Free Software Foundation, Inc.
License GPLv3+: GNU GPL version 3 or later <http://gnu.org/licenses/gpl.html>.
This is free software: you are free to change and redistribute it.
There is NO WARRANTY, to the extent permitted by law.
Written by John Gilmore and Jay Fenlason.
You have /usr/bin/unzip
Searching Bio::MAGETAB () on cpanmetadb ...
Unpacking Bio-MAGETAB-1.31.tar.gz
--> Working on Bio::MAGETAB
Fetching http://www.cpan.org/authors/id/T/TF/TFRAYNER/Bio-MAGETAB-1.31.tar.gz ... OK
Bio-MAGETAB-1.31/
Bio-MAGETAB-1.31/Changes
Bio-MAGETAB-1.31/inc/
Bio-MAGETAB-1.31/lib/
Bio-MAGETAB-1.31/LICENSE
Bio-MAGETAB-1.31/magetab-om.mdzip
Bio-MAGETAB-1.31/Makefile.PL
Bio-MAGETAB-1.31/MANIFEST
Bio-MAGETAB-1.31/META.yml
Bio-MAGETAB-1.31/README
Bio-MAGETAB-1.31/scripts/
Bio-MAGETAB-1.31/sql/
Bio-MAGETAB-1.31/t/
Bio-MAGETAB-1.31/t/001_load.t
Bio-MAGETAB-1.31/t/002_base_class.t
Bio-MAGETAB-1.31/t/002_data.t
Bio-MAGETAB-1.31/t/002_design_element.t
Bio-MAGETAB-1.31/t/002_event.t
Bio-MAGETAB-1.31/t/002_material.t
Bio-MAGETAB-1.31/t/002_node.t
Bio-MAGETAB-1.31/t/003_array_design.t
Bio-MAGETAB-1.31/t/003_assay.t
Bio-MAGETAB-1.31/t/003_comment.t
Bio-MAGETAB-1.31/t/003_composite_element.t
Bio-MAGETAB-1.31/t/003_contact.t
Bio-MAGETAB-1.31/t/003_controlled_term.t
Bio-MAGETAB-1.31/t/003_data_acquisition.t
Bio-MAGETAB-1.31/t/003_data_file.t
Bio-MAGETAB-1.31/t/003_data_matrix.t
Bio-MAGETAB-1.31/t/003_database_entry.t
Bio-MAGETAB-1.31/t/003_edge.t
Bio-MAGETAB-1.31/t/003_extract.t
Bio-MAGETAB-1.31/t/003_factor.t
Bio-MAGETAB-1.31/t/003_factor_value.t
Bio-MAGETAB-1.31/t/003_feature.t
Bio-MAGETAB-1.31/t/003_investigation.t
Bio-MAGETAB-1.31/t/003_labeled_extract.t
Bio-MAGETAB-1.31/t/003_matrix_column.t
Bio-MAGETAB-1.31/t/003_matrix_row.t
Bio-MAGETAB-1.31/t/003_measurement.t
Bio-MAGETAB-1.31/t/003_normalization.t
Bio-MAGETAB-1.31/t/003_parameter_value.t
Bio-MAGETAB-1.31/t/003_protocol.t
Bio-MAGETAB-1.31/t/003_protocol_application.t
Bio-MAGETAB-1.31/t/003_protocol_parameter.t
Bio-MAGETAB-1.31/t/003_publication.t
Bio-MAGETAB-1.31/t/003_reporter.t
Bio-MAGETAB-1.31/t/003_sample.t
Bio-MAGETAB-1.31/t/003_sdrf.t
Bio-MAGETAB-1.31/t/003_sdrf_row.t
Bio-MAGETAB-1.31/t/003_source.t
Bio-MAGETAB-1.31/t/003_term_source.t
Bio-MAGETAB-1.31/t/004_magetab.t
Bio-MAGETAB-1.31/t/012_builder.t
Bio-MAGETAB-1.31/t/013_adf.t
Bio-MAGETAB-1.31/t/013_data_matrix.t
Bio-MAGETAB-1.31/t/013_idf.t
Bio-MAGETAB-1.31/t/013_reader.t
Bio-MAGETAB-1.31/t/013_sdrf.t
Bio-MAGETAB-1.31/t/014_persistence.t
Bio-MAGETAB-1.31/t/015_dbloader.t
Bio-MAGETAB-1.31/t/100_pod_correctness.t
Bio-MAGETAB-1.31/t/100_pod_coverage.t
Bio-MAGETAB-1.31/t/examples/
Bio-MAGETAB-1.31/t/testlib/
Bio-MAGETAB-1.31/t/testlib/CommonTests.pm
Bio-MAGETAB-1.31/t/examples/affy_dm.txt
Bio-MAGETAB-1.31/t/examples/affy_sdrf.txt
Bio-MAGETAB-1.31/t/examples/affymetrix.idf
Bio-MAGETAB-1.31/sql/tangram_with_indices.sql
Bio-MAGETAB-1.31/scripts/deploy_magetab_db.pl
Bio-MAGETAB-1.31/scripts/fix_ae_magetab.pl
Bio-MAGETAB-1.31/scripts/read_magetab.pl
Bio-MAGETAB-1.31/scripts/unload_magetab_namespace.pl
Bio-MAGETAB-1.31/lib/Bio/
Bio-MAGETAB-1.31/lib/Bio/MAGETAB/
Bio-MAGETAB-1.31/lib/Bio/MAGETAB.pm
Bio-MAGETAB-1.31/lib/Bio/MAGETAB/ArrayDesign.pm
Bio-MAGETAB-1.31/lib/Bio/MAGETAB/Assay.pm
Bio-MAGETAB-1.31/lib/Bio/MAGETAB/BaseClass.pm
Bio-MAGETAB-1.31/lib/Bio/MAGETAB/Comment.pm
Bio-MAGETAB-1.31/lib/Bio/MAGETAB/CompositeElement.pm
Bio-MAGETAB-1.31/lib/Bio/MAGETAB/Contact.pm
Bio-MAGETAB-1.31/lib/Bio/MAGETAB/ControlledTerm.pm
Bio-MAGETAB-1.31/lib/Bio/MAGETAB/Data.pm
Bio-MAGETAB-1.31/lib/Bio/MAGETAB/DataAcquisition.pm
Bio-MAGETAB-1.31/lib/Bio/MAGETAB/DatabaseEntry.pm
Bio-MAGETAB-1.31/lib/Bio/MAGETAB/DataFile.pm
Bio-MAGETAB-1.31/lib/Bio/MAGETAB/DataMatrix.pm
Bio-MAGETAB-1.31/lib/Bio/MAGETAB/DesignElement.pm
Bio-MAGETAB-1.31/lib/Bio/MAGETAB/Edge.pm
Bio-MAGETAB-1.31/lib/Bio/MAGETAB/Event.pm
Bio-MAGETAB-1.31/lib/Bio/MAGETAB/Extract.pm
Bio-MAGETAB-1.31/lib/Bio/MAGETAB/Factor.pm
Bio-MAGETAB-1.31/lib/Bio/MAGETAB/FactorValue.pm
Bio-MAGETAB-1.31/lib/Bio/MAGETAB/Feature.pm
Bio-MAGETAB-1.31/lib/Bio/MAGETAB/Investigation.pm
Bio-MAGETAB-1.31/lib/Bio/MAGETAB/LabeledExtract.pm
Bio-MAGETAB-1.31/lib/Bio/MAGETAB/Material.pm
Bio-MAGETAB-1.31/lib/Bio/MAGETAB/MatrixColumn.pm
Bio-MAGETAB-1.31/lib/Bio/MAGETAB/MatrixRow.pm
Bio-MAGETAB-1.31/lib/Bio/MAGETAB/Measurement.pm
Bio-MAGETAB-1.31/lib/Bio/MAGETAB/Node.pm
Bio-MAGETAB-1.31/lib/Bio/MAGETAB/Normalization.pm
Bio-MAGETAB-1.31/lib/Bio/MAGETAB/ParameterValue.pm
Bio-MAGETAB-1.31/lib/Bio/MAGETAB/Protocol.pm
Bio-MAGETAB-1.31/lib/Bio/MAGETAB/ProtocolApplication.pm
Bio-MAGETAB-1.31/lib/Bio/MAGETAB/ProtocolParameter.pm
Bio-MAGETAB-1.31/lib/Bio/MAGETAB/Publication.pm
Bio-MAGETAB-1.31/lib/Bio/MAGETAB/Reporter.pm
Bio-MAGETAB-1.31/lib/Bio/MAGETAB/Sample.pm
Bio-MAGETAB-1.31/lib/Bio/MAGETAB/SDRF.pm
Bio-MAGETAB-1.31/lib/Bio/MAGETAB/SDRFRow.pm
Bio-MAGETAB-1.31/lib/Bio/MAGETAB/Source.pm
Bio-MAGETAB-1.31/lib/Bio/MAGETAB/TermSource.pm
Bio-MAGETAB-1.31/lib/Bio/MAGETAB/Types.pm
Bio-MAGETAB-1.31/lib/Bio/MAGETAB/Util/
Bio-MAGETAB-1.31/lib/Bio/MAGETAB/Util/Builder.pm
Bio-MAGETAB-1.31/lib/Bio/MAGETAB/Util/DBLoader.pm
Bio-MAGETAB-1.31/lib/Bio/MAGETAB/Util/Persistence.pm
Bio-MAGETAB-1.31/lib/Bio/MAGETAB/Util/Reader/
Bio-MAGETAB-1.31/lib/Bio/MAGETAB/Util/Reader.pm
Bio-MAGETAB-1.31/lib/Bio/MAGETAB/Util/RewriteAE.pm
Bio-MAGETAB-1.31/lib/Bio/MAGETAB/Util/Writer/
Bio-MAGETAB-1.31/lib/Bio/MAGETAB/Util/Writer.pm
Bio-MAGETAB-1.31/lib/Bio/MAGETAB/Util/Writer/ADF.pm
Bio-MAGETAB-1.31/lib/Bio/MAGETAB/Util/Writer/GraphViz.pm
Bio-MAGETAB-1.31/lib/Bio/MAGETAB/Util/Writer/IDF.pm
Bio-MAGETAB-1.31/lib/Bio/MAGETAB/Util/Writer/SDRF.pm
Bio-MAGETAB-1.31/lib/Bio/MAGETAB/Util/Writer/Tabfile.pm
Bio-MAGETAB-1.31/lib/Bio/MAGETAB/Util/Reader/ADF.pm
Bio-MAGETAB-1.31/lib/Bio/MAGETAB/Util/Reader/DataMatrix.pm
Bio-MAGETAB-1.31/lib/Bio/MAGETAB/Util/Reader/IDF.pm
Bio-MAGETAB-1.31/lib/Bio/MAGETAB/Util/Reader/SDRF.pm
Bio-MAGETAB-1.31/lib/Bio/MAGETAB/Util/Reader/Tabfile.pm
Bio-MAGETAB-1.31/lib/Bio/MAGETAB/Util/Reader/TagValueFile.pm
Bio-MAGETAB-1.31/inc/Module/
Bio-MAGETAB-1.31/inc/Module/AutoInstall.pm
Bio-MAGETAB-1.31/inc/Module/Install/
Bio-MAGETAB-1.31/inc/Module/Install.pm
Bio-MAGETAB-1.31/inc/Module/Install/AutoInstall.pm
Bio-MAGETAB-1.31/inc/Module/Install/Base.pm
Bio-MAGETAB-1.31/inc/Module/Install/Can.pm
Bio-MAGETAB-1.31/inc/Module/Install/Fetch.pm
Bio-MAGETAB-1.31/inc/Module/Install/Include.pm
Bio-MAGETAB-1.31/inc/Module/Install/Makefile.pm
Bio-MAGETAB-1.31/inc/Module/Install/Metadata.pm
Bio-MAGETAB-1.31/inc/Module/Install/Scripts.pm
Bio-MAGETAB-1.31/inc/Module/Install/Win32.pm
Bio-MAGETAB-1.31/inc/Module/Install/WriteAll.pm
Entering Bio-MAGETAB-1.31
Checking configure dependencies from META.yml
Checking if you have ExtUtils::MakeMaker 6.59 ... Yes (7.24)
Running Makefile.PL
Configuring Bio-MAGETAB-1.31 ... Can't locate inc/Module/Install.pm in @INC (you may need to install the inc::Module::Install module) (@INC contains: /home/ryan/perl5/perlbrew/perls/perl-blead/lib/site_perl/5.26.0/x86_64-linux /home/ryan/perl5/perlbrew/perls/perl-blead/lib/site_perl/5.26.0 /home/ryan/perl5/perlbrew/perls/perl-blead/lib/5.26.0/x86_64-linux /home/ryan/perl5/perlbrew/perls/perl-blead/lib/5.26.0) at Makefile.PL line 25.
BEGIN failed--compilation aborted at Makefile.PL line 25.
! Configure failed for Bio-MAGETAB-1.31. See /home/ryan/.cpanm/work/1493623387.5065/build.log for details.
N/A
Command [cpanm --reinstall --verbose Bio::MAGETAB] terminated with exit code 1 ($? = 256) under the following perl environment:
Command terminated with non-zero status.
Current perl:
Name: perl-blead
Path: /home/ryan/perl5/perlbrew/perls/perl-blead/bin/perl
Config: -de -Dprefix=/home/ryan/perl5/perlbrew/perls/perl-blead -Dusedevel -Aeval:scriptdir=/home/ryan/perl5/perlbrew/perls/perl-blead/bin
Compiled at: Mar 30 2017 03:10:09
perlbrew:
version: 0.78
ENV:
PERLBREW_ROOT: /home/ryan/perl5/perlbrew
PERLBREW_HOME: /home/ryan/.perlbrew
PERLBREW_PATH: /home/ryan/perl5/perlbrew/bin:/home/ryan/perl5/perlbrew/perls/perl-blead/bin
PERLBREW_MANPATH: /home/ryan/perl5/perlbrew/perls/perl-blead/man