90 lines
4 KiB
Text
90 lines
4 KiB
Text
perl-blead
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==========
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cpanm (App::cpanminus) 1.7043 on perl 5.026000 built for x86_64-linux
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Work directory is /home/ryan/.cpanm/work/1493239021.1038
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You have make /usr/bin/make
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You have LWP 6.26
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You have /bin/tar: tar (GNU tar) 1.29
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Copyright (C) 2015 Free Software Foundation, Inc.
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License GPLv3+: GNU GPL version 3 or later <http://gnu.org/licenses/gpl.html>.
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This is free software: you are free to change and redistribute it.
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There is NO WARRANTY, to the extent permitted by law.
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Written by John Gilmore and Jay Fenlason.
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You have /usr/bin/unzip
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Searching Bio::Homology::InterologWalk::Direct () on cpanmetadb ...
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Unpacking Bio-Homology-InterologWalk-0.12.tar.gz
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--> Working on Bio::Homology::InterologWalk::Direct
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Fetching http://www.cpan.org/authors/id/G/GG/GGALLONE/Bio-Homology-InterologWalk-0.12.tar.gz ... OK
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Bio-Homology-InterologWalk-0.12/
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Bio-Homology-InterologWalk-0.12/META.yml
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Bio-Homology-InterologWalk-0.12/LICENSE
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Bio-Homology-InterologWalk-0.12/scripts/
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Bio-Homology-InterologWalk-0.12/scripts/Code/
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Bio-Homology-InterologWalk-0.12/scripts/Code/doInterologWalk.pl
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Bio-Homology-InterologWalk-0.12/scripts/Code/doNets.pl
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Bio-Homology-InterologWalk-0.12/scripts/Code/getDirectInteractions.pl
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Bio-Homology-InterologWalk-0.12/scripts/Code/doScores.pl
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Bio-Homology-InterologWalk-0.12/scripts/Data/
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Bio-Homology-InterologWalk-0.12/scripts/Data/mmus_test.txt
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Bio-Homology-InterologWalk-0.12/scripts/Data/psi-mi.obo
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Bio-Homology-InterologWalk-0.12/Makefile.PL
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Bio-Homology-InterologWalk-0.12/Changes
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Bio-Homology-InterologWalk-0.12/t/
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Bio-Homology-InterologWalk-0.12/t/testdata/
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Bio-Homology-InterologWalk-0.12/t/testdata/mmus.txt
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Bio-Homology-InterologWalk-0.12/t/Bio-Homology-InterologWalk.t
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Bio-Homology-InterologWalk-0.12/lib/
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Bio-Homology-InterologWalk-0.12/lib/Bio/
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Bio-Homology-InterologWalk-0.12/lib/Bio/Homology/
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Bio-Homology-InterologWalk-0.12/lib/Bio/Homology/InterologWalk.pm
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Bio-Homology-InterologWalk-0.12/README
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Bio-Homology-InterologWalk-0.12/MANIFEST
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Entering Bio-Homology-InterologWalk-0.12
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Checking configure dependencies from META.yml
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Checking if you have ExtUtils::MakeMaker 6.58 ... Yes (7.24)
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Running Makefile.PL
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Configuring Bio-Homology-InterologWalk-0.12 ... Checking for recommended module Algorithm::Combinatorics >= 0.25 ... ok.
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Checking for required module Bio::EnsEMBL::Registry ... not found.
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*** Bio::EnsEMBL::Registry could not be found.
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This means either the Ensembl API is not present,
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or the environment has not been set up properly.
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Please follow instructions on README file to install
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and set up the Ensembl API before continuing.
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Checking for required module Bio::Perl ... ok.
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Checking for required module Carp ... ok.
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Checking for required module DBD::CSV ... ok.
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Checking for recommended module Data::PowerSet >= 0.05 ... ok.
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Checking for required module File::Glob ... ok.
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Checking for required module GO::Parser ... not found.
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Checking for recommended module Getopt::Long >= 2.38 ... ok.
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Checking for recommended module Graph >= 0.94 ... ok.
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Checking for required module List::Util ... ok.
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Checking for required module REST::Client ... ok.
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Checking for required module String::Approx ... ok.
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Checking for recommended module URI::Escape >= 1.53 ... ok.
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Required modules/packages are missing. Install these first.
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! Configure failed for Bio-Homology-InterologWalk-0.12. See /home/ryan/.cpanm/work/1493239021.1038/build.log for details.
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N/A
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Command [cpanm --reinstall --verbose Bio::Homology::InterologWalk::Direct] terminated with exit code 1 ($? = 256) under the following perl environment:
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Command terminated with non-zero status.
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Current perl:
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Name: perl-blead
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Path: /home/ryan/perl5/perlbrew/perls/perl-blead/bin/perl
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Config: -de -Dprefix=/home/ryan/perl5/perlbrew/perls/perl-blead -Dusedevel -Aeval:scriptdir=/home/ryan/perl5/perlbrew/perls/perl-blead/bin
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Compiled at: Mar 30 2017 03:10:09
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perlbrew:
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version: 0.78
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ENV:
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PERLBREW_ROOT: /home/ryan/perl5/perlbrew
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PERLBREW_HOME: /home/ryan/.perlbrew
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PERLBREW_PATH: /home/ryan/perl5/perlbrew/bin:/home/ryan/perl5/perlbrew/perls/perl-blead/bin
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PERLBREW_MANPATH: /home/ryan/perl5/perlbrew/perls/perl-blead/man
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