116 lines
5.6 KiB
Text
116 lines
5.6 KiB
Text
perl-blead
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==========
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cpanm (App::cpanminus) 1.7043 on perl 5.026000 built for x86_64-linux
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Work directory is /home/ryan/.cpanm/work/1493065266.25525
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You have make /usr/bin/make
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You have LWP 6.26
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You have /bin/tar: tar (GNU tar) 1.29
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Copyright (C) 2015 Free Software Foundation, Inc.
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License GPLv3+: GNU GPL version 3 or later <http://gnu.org/licenses/gpl.html>.
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This is free software: you are free to change and redistribute it.
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There is NO WARRANTY, to the extent permitted by law.
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Written by John Gilmore and Jay Fenlason.
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You have /usr/bin/unzip
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Searching Bio::Graphics::Glyph::decorated_gene () on cpanmetadb ...
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Unpacking Bio-Graphics-Glyph-decorated_gene-0.03.tar.gz
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--> Working on Bio::Graphics::Glyph::decorated_gene
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Fetching http://www.cpan.org/authors/id/C/CH/CHRISFR/Bio-Graphics-Glyph-decorated_gene-0.03.tar.gz ... OK
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Bio-Graphics-Glyph-decorated_gene-0.03/
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Bio-Graphics-Glyph-decorated_gene-0.03/Changes
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Bio-Graphics-Glyph-decorated_gene-0.03/MANIFEST
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Bio-Graphics-Glyph-decorated_gene-0.03/Makefile.PL
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Bio-Graphics-Glyph-decorated_gene-0.03/README
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Bio-Graphics-Glyph-decorated_gene-0.03/lib/
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Bio-Graphics-Glyph-decorated_gene-0.03/lib/Bio/
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Bio-Graphics-Glyph-decorated_gene-0.03/lib/Bio/Graphics/
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Bio-Graphics-Glyph-decorated_gene-0.03/lib/Bio/Graphics/Glyph/
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Bio-Graphics-Glyph-decorated_gene-0.03/lib/Bio/Graphics/Glyph/decorated_gene.pm
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Bio-Graphics-Glyph-decorated_gene-0.03/lib/Bio/Graphics/Glyph/decorated_transcript.pm
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Bio-Graphics-Glyph-decorated_gene-0.03/t/
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Bio-Graphics-Glyph-decorated_gene-0.03/t/borders.t
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Bio-Graphics-Glyph-decorated_gene-0.03/t/colours.t
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Bio-Graphics-Glyph-decorated_gene-0.03/t/data/
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Bio-Graphics-Glyph-decorated_gene-0.03/t/data/decorated_transcript_t1.gff
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Bio-Graphics-Glyph-decorated_gene-0.03/t/data/invalid.gff
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Bio-Graphics-Glyph-decorated_gene-0.03/t/data/misc2.gff
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Bio-Graphics-Glyph-decorated_gene-0.03/t/heights.t
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Bio-Graphics-Glyph-decorated_gene-0.03/t/imagemaps.t
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Bio-Graphics-Glyph-decorated_gene-0.03/t/invalid.t
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Bio-Graphics-Glyph-decorated_gene-0.03/t/labels.t
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Bio-Graphics-Glyph-decorated_gene-0.03/t/misc1.t
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Bio-Graphics-Glyph-decorated_gene-0.03/t/misc2.t
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Bio-Graphics-Glyph-decorated_gene-0.03/t/mrna_level.t
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Bio-Graphics-Glyph-decorated_gene-0.03/t/offsets.t
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Bio-Graphics-Glyph-decorated_gene-0.03/t/padding.t
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Bio-Graphics-Glyph-decorated_gene-0.03/t/visibility.t
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Entering Bio-Graphics-Glyph-decorated_gene-0.03
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META.yml/json not found. Creating skeleton for it.
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Running Makefile.PL
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Configuring Bio-Graphics-Glyph-decorated_gene-0.03 ... Checking if your kit is complete...
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Looks good
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Generating a Unix-style Makefile
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Writing Makefile for Bio::Graphics::Glyph::decorated_gene
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Writing MYMETA.yml and MYMETA.json
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Checking dependencies from MYMETA.json ...
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Checking if you have List::Util 0 ... Yes (1.47)
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Checking if you have ExtUtils::MakeMaker 0 ... Yes (7.24)
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Checking if you have Bio::Graphics 2.02 ... Yes (2.40)
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OK
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Building and testing Bio-Graphics-Glyph-decorated_gene-0.02 ... cp lib/Bio/Graphics/Glyph/decorated_transcript.pm blib/lib/Bio/Graphics/Glyph/decorated_transcript.pm
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cp lib/Bio/Graphics/Glyph/decorated_gene.pm blib/lib/Bio/Graphics/Glyph/decorated_gene.pm
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Manifying 2 pod documents
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PERL_DL_NONLAZY=1 "/home/ryan/perl5/perlbrew/perls/perl-blead/bin/perl5.26.0" "-MExtUtils::Command::MM" "-MTest::Harness" "-e" "undef *Test::Harness::Switches; test_harness(0, 'blib/lib', 'blib/arch')" t/*.t
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Unescaped left brace in regex is deprecated here (and will be fatal in Perl 5.30), passed through in regex; marked by <-- HERE in m/function(\s+)([a-z0-9_]+)(\s*){ <-- HERE (.*?)}/ at /home/ryan/perl5/perlbrew/perls/perl-blead/lib/site_perl/5.26.0/Inline/Echo.pm line 25.
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Unescaped left brace in regex is deprecated here (and will be fatal in Perl 5.30), passed through in regex; marked by <-- HERE in m/function(\s+)([a-z0-9_]+)(\s*){ <-- HERE (.*?)}/ at /home/ryan/perl5/perlbrew/perls/perl-blead/lib/site_perl/5.26.0/Inline/Nouse.pm line 28.
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t/borders.t ..... ok
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t/colours.t ..... ok
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t/heights.t ..... ok
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t/imagemaps.t ... ok
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# Failed test 'expected warning'
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# at t/invalid.t line 70.
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# Failed test 'expected warning'
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# at t/invalid.t line 103.
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# Looks like you failed 2 tests of 21.
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t/invalid.t .....
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Dubious, test returned 2 (wstat 512, 0x200)
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Failed 2/21 subtests
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t/labels.t ...... ok
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t/misc1.t ....... ok
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t/misc2.t ....... ok
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t/mrna_level.t .. ok
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t/offsets.t ..... ok
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t/padding.t ..... ok
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t/visibility.t .. ok
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Test Summary Report
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-------------------
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t/invalid.t (Wstat: 512 Tests: 21 Failed: 2)
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Failed tests: 13, 16
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Non-zero exit status: 2
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Files=12, Tests=327, 21 wallclock secs ( 0.04 usr 0.01 sys + 2.49 cusr 0.15 csys = 2.69 CPU)
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Result: FAIL
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Failed 1/12 test programs. 2/327 subtests failed.
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Makefile:846: recipe for target 'test_dynamic' failed
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make: *** [test_dynamic] Error 255
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! Installing Bio::Graphics::Glyph::decorated_gene failed. See /home/ryan/.cpanm/work/1493065266.25525/build.log for details. Retry with --force to force install it.
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FAIL
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Command [cpanm --reinstall --verbose Bio::Graphics::Glyph::decorated_gene] terminated with exit code 1 ($? = 256) under the following perl environment:
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Command terminated with non-zero status.
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Current perl:
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Name: perl-blead
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Path: /home/ryan/perl5/perlbrew/perls/perl-blead/bin/perl
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Config: -de -Dprefix=/home/ryan/perl5/perlbrew/perls/perl-blead -Dusedevel -Aeval:scriptdir=/home/ryan/perl5/perlbrew/perls/perl-blead/bin
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Compiled at: Mar 30 2017 03:10:09
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perlbrew:
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version: 0.78
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ENV:
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PERLBREW_ROOT: /home/ryan/perl5/perlbrew
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PERLBREW_HOME: /home/ryan/.perlbrew
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PERLBREW_PATH: /home/ryan/perl5/perlbrew/bin:/home/ryan/perl5/perlbrew/perls/perl-blead/bin
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PERLBREW_MANPATH: /home/ryan/perl5/perlbrew/perls/perl-blead/man
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