101 lines
4.2 KiB
Text
101 lines
4.2 KiB
Text
perl-blead
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==========
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cpanm (App::cpanminus) 1.7043 on perl 5.026000 built for x86_64-linux
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Work directory is /home/ryan/.cpanm/work/1493401407.1625
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You have make /usr/bin/make
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You have LWP 6.26
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You have /bin/tar: tar (GNU tar) 1.29
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Copyright (C) 2015 Free Software Foundation, Inc.
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License GPLv3+: GNU GPL version 3 or later <http://gnu.org/licenses/gpl.html>.
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This is free software: you are free to change and redistribute it.
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There is NO WARRANTY, to the extent permitted by law.
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Written by John Gilmore and Jay Fenlason.
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You have /usr/bin/unzip
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Searching Bio::Das::Segment::Feature () on cpanmetadb ...
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Unpacking Bio-Das-0.20.tar.gz
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--> Working on Bio::Das::Segment::Feature
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Fetching http://www.cpan.org/authors/id/L/LD/LDS/Bio-Das-0.20.tar.gz ... OK
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Bio-Das-0.20/
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Bio-Das-0.20/Das/
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Bio-Das-0.20/Das/Segment.pm
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Bio-Das-0.20/Das/Stylesheet.pm
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Bio-Das-0.20/Das/Type.pm
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Bio-Das-0.20/Das/Segment/
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Bio-Das-0.20/Das/Segment/Feature.pm
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Bio-Das-0.20/Das/Segment/Transcript.pm
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Bio-Das-0.20/Das/Segment/GappedAlignment.pm
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Bio-Das-0.20/Das/Util.pm
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Bio-Das-0.20/Das/Source.pm
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Bio-Das-0.20/Das/Parser.pm
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Bio-Das-0.20/README
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Bio-Das-0.20/Das.pm
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Bio-Das-0.20/MANIFEST
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Bio-Das-0.20/t/
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Bio-Das-0.20/t/01das.t
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Bio-Das-0.20/Makefile.PL
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Bio-Das-0.20/Changes
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Entering Bio-Das-0.20
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META.yml/json not found. Creating skeleton for it.
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Running Makefile.PL
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Configuring Bio-Das-0.20 ... Checking if your kit is complete...
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Looks good
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Generating a Unix-style Makefile
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Writing Makefile for Bio::Das
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Writing MYMETA.yml and MYMETA.json
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Checking dependencies from MYMETA.json ...
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Checking if you have LWP 5 ... Yes (6.26)
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Checking if you have ExtUtils::MakeMaker 0 ... Yes (7.24)
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Checking if you have XML::Parser 1 ... Yes (2.44)
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OK
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Building and testing Bio-Das-0.20 ... cp Das/Segment/Transcript.pm blib/lib/Bio/Das/Segment/Transcript.pm
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cp Das/Segment/Feature.pm blib/lib/Bio/Das/Segment/Feature.pm
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cp Das/Parser.pm blib/lib/Bio/Das/Parser.pm
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cp Das/Segment.pm blib/lib/Bio/Das/Segment.pm
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cp Das/Type.pm blib/lib/Bio/Das/Type.pm
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cp Das/Stylesheet.pm blib/lib/Bio/Das/Stylesheet.pm
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cp Das/Segment/GappedAlignment.pm blib/lib/Bio/Das/Segment/GappedAlignment.pm
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cp Das.pm blib/lib/Bio/Das.pm
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cp Das/Source.pm blib/lib/Bio/Das/Source.pm
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cp Das/Util.pm blib/lib/Bio/Das/Util.pm
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Manifying 8 pod documents
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PERL_DL_NONLAZY=1 "/home/ryan/perl5/perlbrew/perls/perl-blead/bin/perl5.26.0" "-MExtUtils::Command::MM" "-MTest::Harness" "-e" "undef *Test::Harness::Switches; test_harness(0, 'blib/lib', 'blib/arch')" t/*.t
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Subroutine type redefined at blib/lib/Bio/Das/Segment.pm line 138.
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Use of uninitialized value in pattern match (m//) at blib/lib/Bio/Das.pm line 148.
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Use of uninitialized value $status_code in numeric eq (==) at blib/lib/Bio/Das.pm line 149.
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Use of uninitialized value in concatenation (.) or string at blib/lib/Bio/Das.pm line 149.
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Can't call method "description" on an undefined value at t/01das.t line 44.
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t/01das.t ..
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Dubious, test returned 255 (wstat 65280, 0xff00)
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Failed 28/30 subtests
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Test Summary Report
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-------------------
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t/01das.t (Wstat: 65280 Tests: 4 Failed: 2)
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Failed tests: 3-4
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Non-zero exit status: 255
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Parse errors: Bad plan. You planned 30 tests but ran 4.
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Files=1, Tests=4, 1 wallclock secs ( 0.01 usr 0.00 sys + 0.06 cusr 0.00 csys = 0.07 CPU)
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Result: FAIL
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Failed 1/1 test programs. 2/4 subtests failed.
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Makefile:870: recipe for target 'test_dynamic' failed
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make: *** [test_dynamic] Error 255
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! Installing Bio::Das::Segment::Feature failed. See /home/ryan/.cpanm/work/1493401407.1625/build.log for details. Retry with --force to force install it.
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FAIL
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Command [cpanm --reinstall --verbose Bio::Das::Segment::Feature] terminated with exit code 1 ($? = 256) under the following perl environment:
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Command terminated with non-zero status.
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Current perl:
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Name: perl-blead
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Path: /home/ryan/perl5/perlbrew/perls/perl-blead/bin/perl
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Config: -de -Dprefix=/home/ryan/perl5/perlbrew/perls/perl-blead -Dusedevel -Aeval:scriptdir=/home/ryan/perl5/perlbrew/perls/perl-blead/bin
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Compiled at: Mar 30 2017 03:10:09
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perlbrew:
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version: 0.78
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ENV:
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PERLBREW_ROOT: /home/ryan/perl5/perlbrew
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PERLBREW_HOME: /home/ryan/.perlbrew
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PERLBREW_PATH: /home/ryan/perl5/perlbrew/bin:/home/ryan/perl5/perlbrew/perls/perl-blead/bin
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PERLBREW_MANPATH: /home/ryan/perl5/perlbrew/perls/perl-blead/man
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